DRSC/TRiP Functional Genomics Resources

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Protein Alignment Roc1b and rbx1

DIOPT Version :10

Sequence 1:NP_652613.1 Gene:Roc1b / 53445 FlyBaseID:FBgn0040291 Length:122 Species:Drosophila melanogaster
Sequence 2:NP_001077013.1 Gene:rbx1 / 449846 ZFINID:ZDB-GENE-041008-106 Length:108 Species:Danio rerio


Alignment Length:97 Identity:68/97 - (70%)
Similarity:79/97 - (81%) Gaps:1/97 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 SGGAVQARTERFVVKKWVAHAMWGWDVAVDNCAICRNHIMNLCIECQAD-PNANQDECTVAWGEC 89
            ||....|..:||.||||.|.|:|.||:.||||||||||||:|||||||: .:|..:|||||||.|
Zfish    11 SGANSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVC 75

  Fly    90 NHAFHYHCIARWLKTRLVCPLDNKEWVYQKYG 121
            |||||:|||:||||||.||||||:||.:||||
Zfish    76 NHAFHFHCISRWLKTRQVCPLDNREWEFQKYG 107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Roc1bNP_652613.1 mRING-H2-C3H2C2D_RBX1 55..115 CDD:438148 47/60 (78%)
rbx1NP_001077013.1 mRING-H2-C3H2C2D_RBX1 40..101 CDD:438148 47/60 (78%)

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