DRSC/TRiP Functional Genomics Resources

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Protein Alignment SC35 and AT1G73530

DIOPT Version :10

Sequence 1:NP_652612.1 Gene:SC35 / 53444 FlyBaseID:FBgn0265298 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_177494.1 Gene:AT1G73530 / 843687 AraportID:AT1G73530 Length:181 Species:Arabidopsis thaliana


Alignment Length:104 Identity:34/104 - (32%)
Similarity:55/104 - (52%) Gaps:8/104 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 AARPPPRIDG-MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 75
            ::.||....| ...|.|..|::|||.:.||..||:.|.:..:.:..|:.....:||||:|:..:.
plant    65 SSSPPSSSSGPKTKLYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGFAFLRYETEE 129

  Fly    76 DAEDALEAMDGRMLDGRELRVQMARYGRPSSPTRSSSGR 114
            :|..|::.|.|:.||||.:.|:.|:       |||...|
plant   130 EAMKAIQGMHGKFLDGRVIFVEEAK-------TRSDMSR 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SC35NP_652612.1 RRM_SRSF2_SRSF8 25..97 CDD:409751 25/71 (35%)
AT1G73530NP_177494.1 RRM 78..158 CDD:440488 29/86 (34%)

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