Protein Alignment SC35 and SCL33

DIOPT Version :10

• Sequence 1: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_001319239.1
• Gene: SCL33 / 841976
• AraportID: AT1G55310
• Length: 299
• Species: Arabidopsis thaliana
• Alignment Length: 229
• Identity: 93/229 - (40%)
• Similarity: 108/229 - (47%)
• Gaps: 44/229 - (19%)

  Fly     6 GAGGLGAARPPPR-------IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT--- 60
            |.|..|.: |.||       .|...||.|.||.:....||||:.||:.|.|.|||:|||.||
plant    13 GYGRRGRS-PSPRGRYGGRSRDLPTSLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGSH 76

  Fly    61 ---------RESRGFAFVRFYDKRDAEDALEAMDGRMLDGRELRVQMARYGRPSSPTRSSSGRRG 116
                     |:.|||.||:|.|..||.||...|||.:|.||||.|..|...| ..||...:..|
plant    77 LCTDTCKASRDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENR-KKPTEMRARER- 139

  Fly   117 GGGGGGSGGRRR------SRSRSPMRRRSRS----------PRRRSYSRSRSPGSHSPERRSKFS 165
              |||....|||      ||||||..||.||          |.||.:.||.||.....:.|..:|
plant   140 --GGGRFRDRRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPPRRHHPRSISPREERYDGRRSYS 202

  Fly   166 RSPV----RGDSRNGIGSGSGGLAPAASRSRSRS 195
            |||.    ||.|...:...|..|:|:..||.|||
plant   203 RSPASDGSRGRSLTPVRGKSRSLSPSPRRSISRS 236

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	40/83 (48%)
SCL33	NP_001319239.1	RRM_SF	36..131	CDD:473069	44/95 (46%)