Protein Alignment SC35 and SR34

DIOPT Version :10

• Sequence 1: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_850933.1
• Gene: SR34 / 839262
• AraportID: AT1G02840
• Length: 303
• Species: Arabidopsis thaliana
• Alignment Length: 274
• Identity: 85/274 - (31%)
• Similarity: 99/274 - (36%)
• Gaps: 116/274 - (42%)

  Fly    27 VDNLTYRTTPEDLRR-----VFERCGEVG--DIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAM 84
            |.||     |.|:|.     :|.:.|.|.  |:.:|     ....|:|||.|.|.||||||:...
plant    11 VGNL-----PGDIREREVEDLFSKYGPVVQIDLKVP-----PRPPGYAFVEFDDARDAEDAIHGR 65

  Fly    85 DGRMLDGRELRVQMARYGRPSS-PTRSS--SGRRGGGGGGGSGGRR------------------- 127
            ||...||..|||::|..||.|| .||.|  .|.||||.|.|.||.|
plant    66 DGYDFDGHRLRVELAHGGRRSSDDTRGSFNGGGRGGGRGRGDGGSRGPSRRSEFRVLVTGLPSSA 130

  Fly   128 ----------------------------------------------------------------- 127
                                                                             
plant   131 SWQDLKDHMRKGGDVCFSQVYRDARGTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVREY 195

  Fly   128 --RSRSRSPMRRRSRSPRR-----RSYSRSRSPG---SHSPERRSKFSRSPVRGDSRN-GIGSGS 181
              |..||||.|.||.|..|     ||.|||||..   |.||:.:|. .|||.:..||: |..|.|
plant   196 DSRKDSRSPSRGRSYSKSRSRSRGRSVSRSRSRSRSRSRSPKAKSS-RRSPAKSTSRSPGPRSKS 259

  Fly   182 GGLAPAASRSRSRS 195
            ...:|..|||||||
plant   260 RSPSPRRSRSRSRS 273

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	29/76 (38%)
SR34	NP_850933.1	RRM1_SF2_plant_like	8..79	CDD:410011	30/77 (39%)
		RRM2_SF2_plant_like	119..194	CDD:410014	0/74 (0%)