Protein Alignment SC35 and RSZ21

DIOPT Version :10

• Sequence 1: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_564208.1
• Gene: RSZ21 / 838997
• AraportID: AT1G23860
• Length: 187
• Species: Arabidopsis thaliana
• Alignment Length: 187
• Identity: 62/187 - (33%)
• Similarity: 84/187 - (44%)
• Gaps: 52/187 - (27%)

  Fly    22 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDG 86
            |..:.|.||..|.|..:|...|:..|.:.::::     .|...|:||:.|.|:|||.||:.|:|.
plant     1 MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWV-----ARRPPGYAFLEFDDERDALDAISALDR 60

  Fly    87 RMLDGRELRVQMARYGRPSSPTRSSSGRRGGGGGGGSGG----------------RRRSRSRSPM 135
            :    ...||:::.        :...||  |||||..||                |...|.|..:
plant    61 K----NGWRVELSH--------KDKGGR--GGGGGRRGGIEDSKCYECGELGHFARECRRGRGSV 111

  Fly   136 RRRSRSPRRR-----SYS-RSRSP-GSHSPERR---------SKFSRS-PVRGDSRN 175
            ||||.|||||     .|: ||.|| |..||.||         ..:||| |.||..|:
plant   112 RRRSPSPRRRRSPDYGYARRSISPRGRRSPPRRRSVTPPRRGRSYSRSPPYRGSRRD 168

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	22/71 (31%)
RSZ21	NP_564208.1	RRM_SRSF3_like	3..70	CDD:409808	23/75 (31%)
		zf-CCHC	90..104	CDD:395050	1/13 (8%)