Protein Alignment SC35 and SR45a

DIOPT Version :10

• Sequence 1: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_563787.2
• Gene: SR45a / 837246
• AraportID: AT1G07350
• Length: 382
• Species: Arabidopsis thaliana
• Alignment Length: 210
• Identity: 74/210 - (35%)
• Similarity: 93/210 - (44%)
• Gaps: 41/210 - (19%)

  Fly    24 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRM 88
            ||.|..|::|.|..||...|.:.|:|.|:::..|.:|||||||.|:......||...:.::|..:
plant    76 SLYVTGLSHRVTERDLEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIRSLDHSV 140

  Fly    89 LDGRELRVQMARYGRPSSPT-------RSSSGRRGGGG----GGGSGGRRRSRSRSPMRRRSRSP 142
            |.||.:.|:.||..|..:||       |::.||.....    ...|..|.||||.|..|.||.||
plant   141 LQGRVITVEKARRRRGRTPTPGKYLGLRTARGRHKSPSYSPRRSVSCSRSRSRSYSSDRGRSYSP 205

  Fly   143 ----------------RRRSYSRSRSPGSHSPE----RRSKFSRSPV-------RGDSRNGIGSG 180
                            |||.||.||||   ||:    ||...|.||.       |..|||.....
plant   206 SYGRRGRSSSYSPFYRRRRFYSPSRSP---SPDDRYNRRRDRSYSPYYRRRDRSRSYSRNCRARD 267

  Fly   181 SGGLAPAASRSRSRS 195
            .........||||||
plant   268 RSPYYMRRYRSRSRS 282

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	26/71 (37%)
SR45a	NP_563787.2	RRM	74..151	CDD:440488	28/74 (38%)