Protein Alignment SC35 and AT5G65260

DIOPT Version :10

• Sequence 1: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_201329.1
• Gene: AT5G65260 / 836651
• AraportID: AT5G65260
• Length: 220
• Species: Arabidopsis thaliana
• Alignment Length: 145
• Identity: 40/145 - (27%)
• Similarity: 65/145 - (44%)
• Gaps: 30/145 - (20%)

  Fly    24 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRM 88
            |:.|.|:.|..|||::::.|:.||.|..:.|..|:: .:.:|||:|.|.:....::||:..:..
plant    93 SVFVGNVDYACTPEEVQQHFQTCGTVHRVTILTDKF-GQPKGFAYVEFVEVEAVQEALQLNESE- 155

  Fly    89 LDGRELRVQMARYGRPSSPTRSSSGRRGGGGGGGSGGRRRSRSR--SP-----MRRRSRSPRRRS 146
            |.||:|:|...|...|                    |.::.|.|  :|     .||...||...|
plant   156 LHGRQLKVLQKRTNVP--------------------GLKQFRGRRFNPYMGYRFRRPFMSPYMYS 200

  Fly   147 -YSRSRSPGSHSPER 160
             |...::|....|.|
plant   201 PYGYGKAPRFRRPMR 215

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	23/71 (32%)
AT5G65260	NP_201329.1	PABP-1234	<61..>219	CDD:130689	40/145 (28%)
		RRM_II_PABPs	93..164	CDD:409747	24/72 (33%)