Sequence 1: | NP_001188794.1 | Gene: | SC35 / 53444 | FlyBaseID: | FBgn0265298 | Length: | 195 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_201225.1 | Gene: | SC35 / 836541 | AraportID: | AT5G64200 | Length: | 303 | Species: | Arabidopsis thaliana |
Alignment Length: | 205 | Identity: | 92/205 - (44%) |
---|---|---|---|
Similarity: | 113/205 - (55%) | Gaps: | 49/205 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSNGGGAGGLGAARPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRG 65
Fly 66 FAFVRFYDKRDAEDALEAMDGRMLDGRELRVQMARYGRPSSPTRSSSGRRGGGGGGGSGGR---- 126
Fly 127 ----RRSRSRSPMRRRSRSPRR-RSYSRSRSP-GSHSPERRSKFSRSPVRGDSRNGIGSGSGGLA 185
Fly 186 PAASRSRSRS 195 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SC35 | NP_001188794.1 | RRM | <24..>100 | CDD:223796 | 41/75 (55%) |
RRM_SRSF2_SRSF8 | 25..97 | CDD:240757 | 38/71 (54%) | ||
SC35 | NP_201225.1 | RRM_SRSF2_SRSF8 | 18..90 | CDD:409751 | 36/71 (51%) |
PHA03307 | <204..>303 | CDD:223039 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 79 | 1.000 | Domainoid score | I3035 |
eggNOG | 1 | 0.900 | - | - | E1_KOG4207 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0003650 | |
OrthoInspector | 1 | 1.000 | - | - | oto3679 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104633 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR23147 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X3014 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
10 | 9.770 |