Protein Alignment SC35 and AT5G54580

DIOPT Version :10

• Sequence 1: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_200269.1
• Gene: AT5G54580 / 835546
• AraportID: AT5G54580
• Length: 156
• Species: Arabidopsis thaliana
• Alignment Length: 126
• Identity: 42/126 - (33%)
• Similarity: 56/126 - (44%)
• Gaps: 24/126 - (19%)

  Fly    17 PRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDAL 81
            |:.:...:|.|..|:.|||.|.||..|.:.|||.|..:..||.:..|:||.|||:....|:...:
plant    50 PQAEPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSAKGI 114

  Fly    82 EAMDGRMLDGRELRVQMARYGRPSSPTRSSSGRRGGGGGGGSGGRRRSRSRSPMRRRSRSP 142
            ..|||:.|||   .|..|.|.||                     |.:|:|..|....||.|
plant   115 AGMDGKFLDG---WVIFAEYARP---------------------REQSQSYQPQNNMSRPP 151

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	29/71 (41%)
AT5G54580	NP_200269.1	RRM	55..138	CDD:440488	35/106 (33%)