Protein Alignment SC35 and PABN1

DIOPT Version :10

• Sequence 1: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_001190511.1
• Gene: PABN1 / 835186
• AraportID: AT5G51120
• Length: 265
• Species: Arabidopsis thaliana
• Alignment Length: 150
• Identity: 42/150 - (28%)
• Similarity: 66/150 - (44%)
• Gaps: 35/150 - (23%)

  Fly     9 GLGAARPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYD 73
            |:.||. ...:|.. |:.|.|:.|..|||::::.|:.||.|..:.|..|:: .:.:|||:|.|.:
plant   129 GVSAAE-KEEVDSR-SIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GQPKGFAYVEFVE 190

  Fly    74 KRDAEDALEAMDGRMLDGRELRVQMAR-----------YGRPSSPTRSSSGRRGGGGGGGSGG-- 125
            ....:::| .::...|.||:::|...|           .|||..|.|           |...|
plant   191 VEAVQNSL-ILNESELHGRQIKVSAKRTNVPGMRQFRGRGRPFRPMR-----------GFMPGVP 243

  Fly   126 -------RRRSRSRSPMRRR 138
                   .|..|.|.|||.|
plant   244 FYPPYAYGRVPRFRRPMRYR 263

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	21/71 (30%)
PABN1	NP_001190511.1	SF-CC1	<56..>213	CDD:273721	26/87 (30%)
		RRM_II_PABPs	142..213	CDD:409747	22/72 (31%)