Protein Alignment SC35 and SCL28

DIOPT Version :10

• Sequence 1: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_197382.3
• Gene: SCL28 / 831999
• AraportID: AT5G18810
• Length: 236
• Species: Arabidopsis thaliana
• Alignment Length: 201
• Identity: 76/201 - (37%)
• Similarity: 100/201 - (49%)
• Gaps: 23/201 - (11%)

  Fly    14 RPPPR---IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKR 75
            ||..|   ..|...|.:.||.....|.|||..|||.|.:.|||:||:.||.|.|||.||::....
plant    35 RPSSRDHESSGPSGLLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAE 99

  Fly    76 DAEDALEAMDGRMLDGRELRVQMARYGRPSSPTRSSSGRRGGGGGGGSGGRRRSRSRSPMRR--- 137
            ||.:|::.|:.:::.|||:.:..|...| .:|...   |...|..|..|..:|:..|||.||
plant   100 DAAEAMKRMNHKVIGGREIAIVFAEENR-KTPQEM---RTTNGTSGRHGDYKRTSHRSPRRRYRS 160

  Fly   138 --RSRSPRRRS--YSRSRSPGSHSPERRSK-FSRSPVRGDSRNGIGSGSGG------LAPAASR- 190
              |||||.||.  :|:.|....:||.|||: .||||:..:.|.........      |.|..||
plant   161 HSRSRSPPRRESRHSKVREDDLYSPRRRSRSISRSPLPRNEREYKSRNCRSPREERVLTPIRSRC 225

  Fly   191 -SRSRS 195
             |||||
plant   226 LSRSRS 231

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	31/71 (44%)
SCL28	NP_197382.3	RRM_SF	47..130	CDD:473069	33/83 (40%)