Protein Alignment SC35 and CCR1

DIOPT Version :10

• Sequence 1: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_195637.1
• Gene: CCR1 / 830082
• AraportID: AT4G39260
• Length: 169
• Species: Arabidopsis thaliana
• Alignment Length: 162
• Identity: 60/162 - (37%)
• Similarity: 73/162 - (45%)
• Gaps: 38/162 - (23%)

  Fly    27 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLDG 91
            |..|.:.|..|||:|.|.:.|:|.|..|..||.:..||||.||.|.|::...||:|.|:|:.|||
plant    10 VGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDG 74

  Fly    92 RELRVQMARYGRPSSPTRSSSGRRGGGGGGGSGGRRRSRSRSPMRRRSRSPRRRSYSRS-----R 151
            |.:.|..|:       :|.|.|  ||||.|||||..||....            .||..     .
plant    75 RVITVNEAQ-------SRGSGG--GGGGRGGSGGGYRSGGGG------------GYSGGGGGGYS 118

  Fly   152 SPGSHSPERRSKFSRSPVRGDSRNGIGSGSGG 183
            ..|....||||            .|.|||.||
plant   119 GGGGGGYERRS------------GGYGSGGGG 138

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	31/69 (45%)
CCR1	NP_195637.1	RRM2_NsCP33_like	7..82	CDD:410187	32/71 (45%)