DRSC/TRiP Functional Genomics Resources

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Protein Alignment SC35 and AT4G13860

DIOPT Version :10

Sequence 1:NP_652612.1 Gene:SC35 / 53444 FlyBaseID:FBgn0265298 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_193122.2 Gene:AT4G13860 / 827020 AraportID:AT4G13860 Length:87 Species:Arabidopsis thaliana


Alignment Length:76 Identity:33/76 - (43%)
Similarity:44/76 - (57%) Gaps:0/76 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLDG 91
            |.||:..||.:.||..|...|.|.|..:.|||||..||||.||.:....:||.|:..|||:.|:|
plant     7 VGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAVSGMDGKELNG 71

  Fly    92 RELRVQMARYG 102
            |.:.|::...|
plant    72 RRVSVKLFGIG 82

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SC35NP_652612.1 RRM_SRSF2_SRSF8 25..97 CDD:409751 31/69 (45%)
AT4G13860NP_193122.2 RRM 2..77 CDD:440488 31/69 (45%)

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