DRSC/TRiP Functional Genomics Resources

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Protein Alignment SC35 and GR-RBP2

DIOPT Version :10

Sequence 1:NP_652612.1 Gene:SC35 / 53444 FlyBaseID:FBgn0265298 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_193121.1 Gene:GR-RBP2 / 827019 AraportID:AT4G13850 Length:158 Species:Arabidopsis thaliana


Alignment Length:120 Identity:48/120 - (40%)
Similarity:62/120 - (51%) Gaps:12/120 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LGAARPPPRIDGMVSLK--VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFY 72
            ||:.|       ::|.|  :..|::.|....||..|...|:|.|..:..||.|..||||.||.|.
plant    27 LGSLR-------LMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFN 84

  Fly    73 DKRDAEDALEAMDGRMLDGRELRVQMARYGRPSSPTR--SSSGRRGGGGGGGSGG 125
            |:..|..|:..|||:.|:||.:||..|. .|||:|..  ...|..|||||.|.||
plant    85 DEGAATAAISEMDGKELNGRHIRVNPAN-DRPSAPRAYGGGGGYSGGGGGYGGGG 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SC35NP_652612.1 RRM_SRSF2_SRSF8 25..97 CDD:409751 29/73 (40%)
GR-RBP2NP_193121.1 PLN03134 1..143 CDD:178680 48/120 (40%)

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