Protein Alignment SC35 and RS31

DIOPT Version :10

• Sequence 1: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_567120.1
• Gene: RS31 / 825359
• AraportID: AT3G61860
• Length: 264
• Species: Arabidopsis thaliana
• Alignment Length: 267
• Identity: 70/267 - (26%)
• Similarity: 89/267 - (33%)
• Gaps: 113/267 - (42%)

  Fly    27 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRML-- 89
            |.|..|.|...||.|:|::.|.|       ||...:| |:|||.|.|:||||||:..:|....
plant     6 VGNFEYETRQSDLERLFDKYGRV-------DRVDMKS-GYAFVYFEDERDAEDAIRKLDNFPFGY 62

  Fly    90 DGRELRVQMAR--YGRPSSPTRSSSG-------------------------------------RR 115
            :.|.|.|:.|:  .|||....::.|.                                     ||
plant    63 EKRRLSVEWAKGERGRPRGDAKAPSNLKPTKTLFVINFDPIRTKEHDIEKHFEPYGKVTNVRIRR 127

  Fly   116 G--------------------------------------GGGGGGSGGRRRSRSRSPMRRRSRSP 142
            .                                      ......:|||...||.||:.||..||
plant   128 NFSFVQFETQEDATKALEATQRSKILDRVVSVEYALKDDDERDDRNGGRSPRRSLSPVYRRRPSP 192

  Fly   143 -----------RRRS--YSRSRSP------GSHSPERRSKFSRSPVRGDSRNGIGSGSGGLAPAA 188
                       ||.|  |.|:|||      |..:.|||    |||..|...:..|...   :|..
plant   193 DYGRRPSPGQGRRPSPDYGRARSPEYDRYKGPAAYERR----RSPDYGRRSSDYGRQR---SPGY 250

  Fly   189 SRSRSRS 195
            .|.||||
plant   251 DRYRSRS 257

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	28/71 (39%)
RS31	NP_567120.1	RRM_SF	2..73	CDD:473069	29/74 (39%)
		RRM2_AtRSp31_like	94..163	CDD:409899	2/68 (3%)
		PTZ00449	<138..209	CDD:185628	14/70 (20%)