Sequence 1: | NP_001188794.1 | Gene: | SC35 / 53444 | FlyBaseID: | FBgn0265298 | Length: | 195 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_567021.1 | Gene: | SCL30 / 824712 | AraportID: | AT3G55460 | Length: | 262 | Species: | Arabidopsis thaliana |
Alignment Length: | 220 | Identity: | 90/220 - (40%) |
---|---|---|---|
Similarity: | 105/220 - (47%) | Gaps: | 44/220 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 GAGGLGAARPPP---------------RIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIP 55
Fly 56 RDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLDGRELRVQMARYG--RPSS---PTRSSSGRR 115
Fly 116 GGGGGGGSGGRRRSRSRSPMRRRSRSPRRRSYSRSR------SPGSHSPERRSKFSRSPVRGD-- 172
Fly 173 ---SRNGIGSGSGGLAPAA-SRSRS 193 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SC35 | NP_001188794.1 | RRM | <24..>100 | CDD:223796 | 37/75 (49%) |
RRM_SRSF2_SRSF8 | 25..97 | CDD:240757 | 35/71 (49%) | ||
SCL30 | NP_567021.1 | RRM | 49..120 | CDD:214636 | 35/70 (50%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 117 | 1.000 | Inparanoid score | I2005 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
3 | 3.010 |