Protein Alignment SC35 and AT3G47120

DIOPT Version :10

• Sequence 1: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_190296.1
• Gene: AT3G47120 / 823865
• AraportID: AT3G47120
• Length: 352
• Species: Arabidopsis thaliana
• Alignment Length: 204
• Identity: 46/204 - (22%)
• Similarity: 76/204 - (37%)
• Gaps: 47/204 - (23%)

  Fly    27 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLDG 91
            |..:.:..|..||..||.:.||:.|:.:.||:.|.:|:||||:.:.|:|....|::.::|.::.|
plant    40 VGGIPFDLTEGDLLAVFSQYGEIVDVNLIRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGALVLG 104

  Fly    92 RELRV------------------------------QMARYGRPSSPTRSSSGRRGGGGGGGSGGR 126
            |.::|                              |.....|..|...|...:|....|.|....
plant   105 RTIKVDHCGAYKKHEEEDEETRRQNREARGVCRAFQRGECTRGDSCKFSHDEKRAANTGWGHEED 169

  Fly   127 RRSRSRSPMRRRSRSPRR----------------RSYSRSRSPG-SHSPERRSKFSRSPVRGDSR 174
            |.|:......|..|...|                ....|:.:.| .|..:|.||:.:..:.|..:
plant   170 RSSKWDHDKNREGRGVCRAFQRGECTRGDSCKFSHDEKRAATTGWGHEEDRSSKWDQDKLNGAKK 234

  Fly   175 NGIGSGSGG 183
            .|...|:.|
plant   235 GGTSFGNRG 243

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	24/99 (24%)
AT3G47120	NP_190296.1	RRM_ist3_like	27..115	CDD:409845	24/74 (32%)
		PABP-1234	38..>310	CDD:130689	46/204 (23%)