Protein Alignment SC35 and RS31a

DIOPT Version :10

• Sequence 1: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_182184.1
• Gene: RS31a / 819273
• AraportID: AT2G46610
• Length: 250
• Species: Arabidopsis thaliana
• Alignment Length: 253
• Identity: 65/253 - (25%)
• Similarity: 84/253 - (33%)
• Gaps: 101/253 - (39%)

  Fly    27 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMD------ 85
            |.|..|.|...||.|:|.:.|.|       .|...:| |:|||.|.|:||||||:...|
plant     6 VGNFDYDTRHSDLERLFSKFGRV-------KRVDMKS-GYAFVYFEDERDAEDAIRRTDNTTFGY 62

  Fly    86 -----------------GRMLDGRE-----------------------------------LRVQM 98
                             |:..||:.                                   |.|:|
plant    63 GRRKLSVEWAKDFQGERGKPRDGKAVSNQRPTKTLFVINFDPIRTRERDMERHFEPYGKVLNVRM 127

  Fly    99 AR------YGRPSSPTRSSSG-----------------RRGGGGGGGSGGRRRSRSRSPMRRRSR 140
            .|      :......|::...                 |..|.......|.||.||.||:.||..
plant   128 RRNFAFVQFATQEDATKALDSTHNSKLLDKVVSVEYALREAGEREDRYAGSRRRRSPSPVYRRRP 192

  Fly   141 SP---RRRS--YSRSRSPGSHSPERRSKFSRSPVRGDSRNGIGSGSGGLAPAASRSRS 193
            ||   ||||  |.|.:.|..:  |||    :||..|...:..|. :...:|...||||
plant   193 SPDYTRRRSPEYDRYKGPAPY--ERR----KSPDYGRRSSDYGR-ARARSPGYDRSRS 243

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	29/127 (23%)
RS31a	NP_182184.1	RRM_SF	2..73	CDD:473069	25/74 (34%)
		RRM_SF	96..165	CDD:473069	5/68 (7%)