Protein Alignment SC35 and Rbmxl2

DIOPT Version :10

• Sequence 1: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_083936.1
• Gene: Rbmxl2 / 76572
• MGIID: 1923822
• Length: 385
• Species: Mus musculus
• Alignment Length: 214
• Identity: 65/214 - (30%)
• Similarity: 87/214 - (40%)
• Gaps: 52/214 - (24%)

  Fly    25 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRML 89
            |.:..|...|..:.|...|.:.|.:.::.:.:||.|.:|||||||.|.:..||:.|...|:|:.|
Mouse    10 LFIGGLNLETDEKGLETAFGKYGRIIEVLLMKDRETSKSRGFAFVTFENPADAKAAARDMNGKSL 74

  Fly    90 DGRELRVQMA-----RYGRPSSPTRSSSGRRGGGGGGGSGGRRR--SR----------------- 130
            ||:.::|..|     ..||...|...|.||..|..|...||.||  ||
Mouse    75 DGKAIKVAQATKPVFESGRRGPPPPRSRGRPRGLRGTRGGGPRRPPSRGGSADEGGYTGDFDLRP 139

  Fly   131 SRSPM--------RRRSRSPRRRSYS---------RSRSPGSH------SPERRSKFSRSPVRGD 172
            ||:||        ||....|:|.:.|         |.|:.||.      .|.||   ...|.|.|
Mouse   140 SRAPMPLKRGPPPRRAGPPPKRAAPSGPARSGAGIRGRAAGSRGRDGYGGPPRR---ELPPPRRD 201

  Fly   173 SRNGIGSGSGGLAPAASRS 191
            ..  :|....|.:|..|.|
Mouse   202 PY--LGPRDEGYSPRESYS 218

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	25/71 (35%)
Rbmxl2	NP_083936.1	RRM_RBMX_like	7..86	CDD:409816	27/75 (36%)
		dnaA	162..>376	CDD:455861	16/62 (26%)
		RBM1CTR	170..214	CDD:400429	12/48 (25%)