DRSC/TRiP Functional Genomics Resources

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Protein Alignment SC35 and AT5G11412

DIOPT Version :10

Sequence 1:NP_652612.1 Gene:SC35 / 53444 FlyBaseID:FBgn0265298 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001119208.1 Gene:AT5G11412 / 6240527 AraportID:AT5G11412 Length:175 Species:Arabidopsis thaliana


Alignment Length:101 Identity:33/101 - (32%)
Similarity:45/101 - (44%) Gaps:19/101 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDG--RML 89
            |..|.:.|..|.||..||:.|::..:.:..||.|..|.|:.||.|   ||||.|..|...  .::
plant    56 VGGLPWETRNEGLRSYFEQFGDIIHVNMVCDRETGRSEGYGFVTF---RDAESATRACQNPKPVI 117

  Fly    90 DGRELRVQMARYG--------------RPSSPTRSS 111
            ||||.:..:|..|              .|..||.:|
plant   118 DGREAKCNLAYIGGRVNNNQNAQQQQVLPMYPTGTS 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SC35NP_652612.1 RRM_SRSF2_SRSF8 25..97 CDD:409751 27/71 (38%)
AT5G11412NP_001119208.1 RRM_SF 52..127 CDD:473069 27/73 (37%)

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