Protein Alignment SC35 and rbm39b

DIOPT Version :10

• Sequence 1: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_001014392.1
• Gene: rbm39b / 541556
• ZFINID: ZDB-GENE-050327-97
• Length: 539
• Species: Danio rerio
• Alignment Length: 136
• Identity: 52/136 - (38%)
• Similarity: 59/136 - (43%)
• Gaps: 24/136 - (17%)

  Fly    73 DKRDAEDALEA------MDGRMLDG-RELRVQMARYGRPSSPTRSSSGRRGGGGGGGSGGRRRSR 130
            |..|.|..|||      ......:| .|.|.:..|.....||   |.|||....||....|.|.|
Zfish     3 DDFDVEAMLEAPYRKGESKSSSANGHNEERSKKKRRSHSRSP---SPGRRRSRSGGRKKSRERRR 64

  Fly   131 SRSPMRRRSRS-PRRRSYSRSRSPGSHSPERRSKFSRSPVRGDSRNGIGSGSGGLA-----PAAS 189
            |||..|:.||| .|:||.|||:..|.     ||:..:||..|...||   |.||..     |..|
Zfish    65 SRSRERKPSRSKERKRSRSRSKDRGG-----RSRGRKSPFMGQKLNG---GPGGKTGPQHFPKHS 121

  Fly   190 RSRSRS 195
            |.||||
Zfish   122 RKRSRS 127

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	9/30 (30%)
rbm39b	NP_001014392.1	SF-CC1	76..526	CDD:273721	24/60 (40%)