Protein Alignment SC35 and SF2

DIOPT Version :9

• Sequence 1: NP_001188794.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_001247139.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Alignment Length: 249
• Identity: 66/249 - (26%)
• Similarity: 82/249 - (32%)
• Gaps: 123/249 - (49%)

  Fly    27 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLDG 91
            |.||......:|::.:|.:.|:|..:    |...|....||||.|.|.|||:||::|.||...||
  Fly    11 VGNLPPDIRTKDIQDLFHKFGKVTFV----DLKNRRGPPFAFVEFEDARDADDAVKARDGYDYDG 71

  Fly    92 RELRVQMARYGRPSS--------PTRSSSGRRG-------------------------------- 116
            ..|||:..|.|.|.|        .:|...||.|
  Fly    72 YRLRVEFPRGGGPGSYRGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTGLPASGSWQDLKDHMR 136

  Fly   117 ----------------------------------------------------------------- 116
                                                                             
  Fly   137 EAGDVCFADTYKDGSGVVEFLRHEDMKYAIKKLDDSRFRSHEGEVAYIRVREDSGDNDRGGGGGG 201

  Fly   117 -GGGGGGSGG------RRRSRSRS----PMRR--RSRSP-RRRSYSRSRSPGSH 156
             |||||||||      |.||||||    |.||  .:.|| ||:|||||||..::
  Fly   202 SGGGGGGSGGGGSRDYRDRSRSRSFSSRPRRRGTPTYSPVRRQSYSRSRSRSNY 255

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_001188794.1	RRM	<24..>100	CDD:223796	28/72 (39%)
		RRM_SRSF2_SRSF8	25..97	CDD:240757	27/69 (39%)
SF2	NP_001247139.1	RRM_SF	3..80	CDD:418427	28/72 (39%)
		RRM2_SRSF1_like	115..188	CDD:410013	0/72 (0%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR23147
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	1.100