Protein Alignment SC35 and Tra2a

DIOPT Version :10

• Sequence 1: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_001119768.2
• Gene: Tra2a / 500116
• RGDID: 1562563
• Length: 282
• Species: Rattus norvegicus
• Alignment Length: 178
• Identity: 68/178 - (38%)
• Similarity: 82/178 - (46%)
• Gaps: 37/178 - (20%)

  Fly    13 ARPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDA 77
            |.|.|.    ..|.|..|:..||..|||.||.|.|.:..:.:..|:.|..|||||||.|....|:
  Rat   111 ANPDPN----TCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDS 171

  Fly    78 EDALEAMDGRMLDGRELRVQMA------------RYGRPSSPTRSSSGRRGGGGGGGSGGRRRSR 130
            ::|:|..:|..||||.:||..:            ..|||:.......|..|||||||.|||||..
  Rat   172 KEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGGGRRRDS 236

  Fly   131 SRS---------------PMRRRSRSP---RRRSYSRSRSPGSHSPER 160
            ...               ..||||.||   |.||.||||   |:||.|
  Rat   237 YYDRGYDRGYDRYEDYDYRYRRRSPSPYYSRYRSRSRSR---SYSPRR 281

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	31/71 (44%)
Tra2a	NP_001119768.2	RRM_TRA2	116..195	CDD:409798	32/82 (39%)