Protein Alignment SC35 and msi1

DIOPT Version :10

• Sequence 1: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: XP_012816886.1
• Gene: msi1 / 496961
• XenbaseID: XB-GENE-490596
• Length: 347
• Species: Xenopus tropicalis
• Alignment Length: 105
• Identity: 33/105 - (31%)
• Similarity: 49/105 - (46%)
• Gaps: 3/105 - (2%)

  Fly    15 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAED 79
            ||........:.:..|:::||.|.||..|...|:|.:..:.||..|:.||||.||.|.|:...:.
 Frog    12 PPDSAHDPCKMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDK 76

  Fly    80 ALEAMDGRMLDGREL--RVQMARYGRPSSPTRSSSGRRGG 117
            .| |.....||.:.:  :|...|..:|...||:.....||
 Frog    77 VL-AQSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGG 115

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	24/73 (33%)
msi1	XP_012816886.1	RRM1_MSI1	20..96	CDD:241203	25/76 (33%)
		PABP-1234	<32..324	CDD:130689	29/85 (34%)
		RRM2_MSI	110..183	CDD:240769	2/6 (33%)