Protein Alignment SC35 and srsf12

DIOPT Version :9

• Sequence 1: NP_001188794.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_001007946.1
• Gene: srsf12 / 493321
• XenbaseID: XB-GENE-994981
• Length: 253
• Species: Xenopus tropicalis
• Alignment Length: 241
• Identity: 85/241 - (35%)
• Similarity: 116/241 - (48%)
• Gaps: 66/241 - (27%)

  Fly    13 ARPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDA 77
            :|||     ..||.|.|:...|.||||||.|.|.|.:.|:|:|.|.|||..||||:::|.|.|||
 Frog     5 SRPP-----NTSLFVRNVADATRPEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYIQFEDVRDA 64

  Fly    78 EDALEAMDGRMLDGRELRVQMAR---------------------------YGRPSSPTRSSS--- 112
            ||||..::.:.:.||::.:|.|:                           :.|..:.:||||
 Frog    65 EDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKERHACSPVDRRRSRSHSRRRTRSRSSSWDR 129

  Fly   113 GRRGGGGGGGSGGRR------RSRSRSPMRRRSRSPRRRSYSRSR------SPGSHSPERRSKFS 165
            |||..|....|..||      :|||:|| :||||:|:|.|:||.|      ||....|:..|..|
 Frog   130 GRRRSGSLKSSRHRRHSYSHSKSRSKSP-QRRSRTPQRHSFSRGRSRSMEKSPSGSPPKESSSGS 193

  Fly   166 RSPVRGDSRNGIGSGSGGLAP----------------AASRSRSRS 195
            :|  |...|....:.|...:|                ::|||||||
 Frog   194 KS--RSGQRRSGSTRSHSKSPRHRHSNSLSQKEAARHSSSRSRSRS 237

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_001188794.1	RRM	<24..>100	CDD:223796	37/75 (49%)
		RRM_SRSF2_SRSF8	25..97	CDD:240757	35/71 (49%)
srsf12	NP_001007946.1	RRM	<5..187	CDD:223796	70/187 (37%)
		RRM_SRSF10_SRSF12	10..93	CDD:240758	38/82 (46%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1533297at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010