DRSC/TRiP Functional Genomics Resources

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Protein Alignment SC35 and LOC4576768

DIOPT Version :10

Sequence 1:NP_652612.1 Gene:SC35 / 53444 FlyBaseID:FBgn0265298 Length:195 Species:Drosophila melanogaster
Sequence 2:XP_001237856.3 Gene:LOC4576768 / 4576768 VectorBaseID:AGAMI1_002317 Length:361 Species:Anopheles gambiae


Alignment Length:259 Identity:57/259 - (22%)
Similarity:80/259 - (30%) Gaps:109/259 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GGGAGGLGAARPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAF 68
            |||.||.|:.......|....|.|..|::.||.:|||..|.:.||:..|.:..|..|..||||||
Mosquito    49 GGGGGGGGSDSQSNARDDERKLFVGGLSWETTEKDLREHFGQYGEIESINVKTDPNTGRSRGFAF 113

  Fly    69 VRFYDKRDAEDALEAMDGRMLDGRELRVQMARYGRP----------------------------- 104
            : .|...|:.|.:.|....:|:.:::..:.|: .||                             
Mosquito   114 I-VYKASDSIDKVVAAGEHVLNNKKVDPKRAK-ARPGKIFVGGLTSDISDEEIKTFFGQFGTIVE 176

  Fly   105 ------------------------------SSPTRSSSGRR-----------------GGGGGGG 122
                                          .:|.::.:|:.                 |||||.|
Mosquito   177 VELPFDKQKNQRKGFCFITYESVQVVNELLKTPKQTIAGKEVDVKKATPKPDGQMGGMGGGGGMG 241

  Fly   123 SGGRRRS---RSRSPMRRRSRSPRRRSYSRSRSPGSHSPERRSKFSRSPVRGDSRNGIGSGSGG 183
            .||..|.   |...|.|...|.                            ||..:.|.|.|.||
Mosquito   242 MGGGGRGGNMRGGMPGRGGMRG----------------------------RGGPKGGFGGGGGG 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SC35NP_652612.1 RRM_SRSF2_SRSF8 25..97 CDD:409751 25/71 (35%)
LOC4576768XP_001237856.3 None

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