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Protein Alignment SC35 and RnpS1
DIOPT Version :9
Sequence 1: | NP_001188794.1 |
Gene: | SC35 / 53444 |
FlyBaseID: | FBgn0265298 |
Length: | 195 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_649903.1 |
Gene: | RnpS1 / 41147 |
FlyBaseID: | FBgn0037707 |
Length: | 374 |
Species: | Drosophila melanogaster |
Alignment Length: | 185 |
Identity: | 65/185 - (35%) |
Similarity: | 83/185 - (44%) |
Gaps: | 36/185 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 GAGGLGAARPPPRID-----------GMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRY 59
|.|.:....||.|.: ..|.:.|..||...|.:.:..:|...|:|.::..|.||:
Fly 191 GRGSVERTPPPKRRERSRSRTRSPSPKQVRIHVGRLTRNVTKDHVFEIFSSFGDVKNVEFPVDRF 255
Fly 60 -TRESRGFAFVRFYDKRDAEDALEAMDGRMLDGRELRV-------QMARYGRPSSPTRSSSGRR- 115
....||.|||.:....|.|.|::.|||..:||:|:.| |.....|||.|.|.....|
Fly 256 HPNFGRGVAFVEYATPEDCESAMKHMDGGQIDGQEITVSPVVLVKQRPPMRRPSPPMRRPQNNRW 320
Fly 116 -----------GGGGGGGSGGRRRS--RSRSPMRRRSRSPRRRSYSRSRSPGSHS 157
.||||||.||||:| |:|...|||||||.|| |.||..|.|
Fly 321 RSPPQFNRFNNRGGGGGGGGGRRQSPMRNRRSPRRRSRSPIRR---RRRSNSSDS 372
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R1169 |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.940 |
|
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