Protein Alignment SC35 and srsf2

DIOPT Version :9

• Sequence 1: NP_001188794.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_989328.1
• Gene: srsf2 / 394953
• XenbaseID: XB-GENE-481125
• Length: 220
• Species: Xenopus tropicalis
• Alignment Length: 191
• Identity: 118/191 - (61%)
• Similarity: 133/191 - (69%)
• Gaps: 23/191 - (12%)

  Fly    14 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAE 78
            ||||.::||.|||||||||||:||.||||||:.|.|||:||||||||:||||||||||:||||||
 Frog     5 RPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAE 69

  Fly    79 DALEAMDGRMLDGRELRVQMARYGRPSSPTRSSSGRRG------GGGGGGSGG---RRRSRSRSP 134
            ||::||||.:||||||||||||||||..   |..||||      |..|..|..   ||||||||.
 Frog    70 DAMDAMDGAVLDGRELRVQMARYGRPPD---SHHGRRGPPPRRYGDYGRRSRSPRRRRRSRSRSK 131

  Fly   135 MRRRSRSPRRRSYSRSRSPGSHSPERRSKFSRSPVRGDSRNGIGSGSGGLAPAASRSRSRS 195
            .|.||||..|.|.|:||| .:.|..|.|..|||..|..|::.          :||||||||
 Frog   132 SRSRSRSRSRYSRSKSRS-RTRSRTRSSSKSRSARRSKSKSS----------SASRSRSRS 181

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_001188794.1	RRM	<24..>100	CDD:223796	63/75 (84%)
		RRM_SRSF2_SRSF8	25..97	CDD:240757	59/71 (83%)
srsf2	NP_989328.1	RRM_SRSF2_SRSF8	16..88	CDD:409751	59/71 (83%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	126	1.000	Domainoid score	I5371
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	201	1.000	Inparanoid score	I3655
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0003650
OrthoInspector	1	1.000	-	-		oto102768
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1169
SonicParanoid	1	1.000	-	-		X3014
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	6	6.080