Protein Alignment SC35 and tra2b

DIOPT Version :10

• Sequence 1: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_957491.1
• Gene: tra2b / 394172
• ZFINID: ZDB-GENE-040426-1094
• Length: 278
• Species: Danio rerio
• Alignment Length: 185
• Identity: 65/185 - (35%)
• Similarity: 83/185 - (44%)
• Gaps: 31/185 - (16%)

  Fly    13 ARPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDA 77
            |.|.|.    ..|.|..|:..||..|||.||.:.|.:.|:.|..|:.:|.|||||.|.|.::.|:
Zfish   117 ANPDPN----CCLGVFGLSLYTTERDLREVFSKYGPLSDVCIVYDQQSRRSRGFALVYFENREDS 177

  Fly    78 EDALEAMDGRMLDGRELRVQMARYGRPSSPTRSSSGRRGGGGGGGSGGRRRSRSRSPMRRRSRSP 142
            ::|.|..:|..||||.:||..:....|.:||......|...|||.|..|||........|...|.
Zfish   178 KEAKERANGMELDGRRIRVDYSITKGPHTPTPGIYMGRPTYGGGPSVSRRRDSYDRGYERGYDSY 242

  Fly   143 RRRSY--SRSRSPGSHSPERRSKFSRSPVRGDSRNGIGSGSGGLAPAASRSRSRS 195
            ..|.|  :|.|||..:       :||.|.|                  |||||||
Zfish   243 EDRDYHNNRRRSPSPY-------YSRGPYR------------------SRSRSRS 272

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	31/71 (44%)
tra2b	NP_957491.1	SF-CC1	23..>199	CDD:273721	35/85 (41%)
		RRM_TRA2B	116..202	CDD:410046	35/88 (40%)