DRSC/TRiP Functional Genomics Resources

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Protein Alignment SC35 and CG3594

DIOPT Version :10

Sequence 1:NP_652612.1 Gene:SC35 / 53444 FlyBaseID:FBgn0265298 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_523855.1 Gene:CG3594 / 37964 FlyBaseID:FBgn0035063 Length:250 Species:Drosophila melanogaster


Alignment Length:117 Identity:32/117 - (27%)
Similarity:53/117 - (45%) Gaps:17/117 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRML 89
            |.|.||.:.||.:||...|...|.|..|.||:.|    ..|||||...|....::|.: :....|
  Fly   116 LYVTNLNFETTKDDLELHFSAAGTVKSIRIPKKR----RGGFAFVEMADLSSFQNAFQ-LHNTEL 175

  Fly    90 DGRELRVQMARYGRPSSPTRSSSGRRGGGGGGGSGGRRRSRSRSPMRRRSRS 141
            .||.::||::..|:..|..:.:.            .::::|..:.||...::
  Fly   176 QGRNIKVQISEAGKKKSANKKNI------------IKQKNRKLAEMRNEQKT 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SC35NP_652612.1 RRM_SRSF2_SRSF8 25..97 CDD:409751 25/71 (35%)
CG3594NP_523855.1 SF-CC1 36..>197 CDD:273721 29/85 (34%)
RRM 116..187 CDD:440488 27/75 (36%)

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