Protein Alignment SC35 and srsf3a

DIOPT Version :9

• Sequence 1: NP_001188794.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_001002053.1
• Gene: srsf3a / 368925
• ZFINID: ZDB-GENE-030616-631
• Length: 174
• Species: Danio rerio
• Alignment Length: 192
• Identity: 67/192 - (34%)
• Similarity: 80/192 - (41%)
• Gaps: 62/192 - (32%)

  Fly    27 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLDG 91
            |.||.......:|.|.|...|.:..:::     .|...|||||.|.|.|||.||:..:|||.|.|
Zfish    18 VGNLGNSGNKTELERAFGYYGPLRSVWV-----ARNPPGFAFVEFEDPRDATDAVRELDGRTLCG 77

  Fly    92 RELRVQMARYGRPSSPTRSSSGRRGGGGGGGSGGRRRSRSRSP-----------------MRRRS 139
            ..:||:|                        |.|.:|||.|.|                 .||||
Zfish    78 CRVRVEM------------------------SNGEKRSRFRGPPPSWSRRPRDDYRRGDDYRRRS 118

  Fly   140 ------RSPRRRSYSRSRSPGSHSPERRSKFSRSPVRGDSRNGIGSGSGGLAPAASRSRSRS 195
                  ||| |||:||||| .|.|.|||.:.|.|..|....:...||        |||||||
Zfish   119 SPPARHRSP-RRSFSRSRS-RSLSRERRRERSLSRDRNYKPSRSFSG--------SRSRSRS 170

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_001188794.1	RRM	<24..>100	CDD:223796	28/72 (39%)
		RRM_SRSF2_SRSF8	25..97	CDD:240757	26/69 (38%)
srsf3a	NP_001002053.1	RRM_SF	10..90	CDD:302621	30/100 (30%)
		RRM	<13..>97	CDD:223796	34/107 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1533297at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	1.010