DRSC/TRiP Functional Genomics Resources

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Protein Alignment SC35 and slirp

DIOPT Version :10

Sequence 1:NP_652612.1 Gene:SC35 / 53444 FlyBaseID:FBgn0265298 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_001292541.1 Gene:slirp / 368358 ZFINID:ZDB-GENE-030729-30 Length:103 Species:Danio rerio


Alignment Length:87 Identity:23/87 - (26%)
Similarity:46/87 - (52%) Gaps:3/87 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLDG 91
            |..:.:....::::..|.:.|:|....:|.|:.|...|||.::.|..:...::||: .|..:::|
Zfish    17 VTKVPWTVATKEVKEYFGQFGQVKRCLLPLDKETGFHRGFCWIGFTTEEGLQNALQ-KDPHIIEG 80

  Fly    92 RELRVQMARYGRPSSPTRSSSG 113
            .:|:||..|  :|.|..|.:.|
Zfish    81 AKLQVQKNR--KPFSGRRLNKG 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SC35NP_652612.1 RRM_SRSF2_SRSF8 25..97 CDD:409751 16/69 (23%)
slirpNP_001292541.1 RRM_SLIRP 14..86 CDD:409688 16/69 (23%)

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