Protein Alignment SC35 and tra2

DIOPT Version :10

• Sequence 1: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_476764.1
• Gene: tra2 / 36619
• FlyBaseID: FBgn0003742
• Length: 264
• Species: Drosophila melanogaster
• Alignment Length: 164
• Identity: 53/164 - (32%)
• Similarity: 69/164 - (42%)
• Gaps: 46/164 - (28%)

  Fly    27 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLDG 91
            |..|...|:...:|.:|.:.|.:..|.:..|..|:.||||.|:.|....||..|.::..|..:||
  Fly   101 VFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDG 165

  Fly    92 RELRVQMARYGRPSSPT--------------RSSSGRRGGGGGGGSGGRR--RSRSRSP------ 134
            |.:||..:...|..:||              ||.|.||         |||  ..||.||
  Fly   166 RRIRVDFSITQRAHTPTPGVYLGRQPRGKAPRSFSPRR---------GRRVYHDRSASPYDNYRD 221

  Fly   135 ------------MRR---RSRSPRRRSYSRSRSP 153
                        :||   |:|..|.|||||||||
  Fly   222 RYDYRNDRYDRNLRRSPSRNRYTRNRSYSRSRSP 255

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	23/69 (33%)
tra2	NP_476764.1	RRM_TRA2	96..175	CDD:409798	24/73 (33%)