Protein Alignment SC35 and Srsf10

DIOPT Version :9

• Sequence 1: NP_001188794.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: XP_006239282.1
• Gene: Srsf10 / 362630
• RGDID: 1311067
• Length: 262
• Species: Rattus norvegicus
• Alignment Length: 207
• Identity: 86/207 - (41%)
• Similarity: 105/207 - (50%)
• Gaps: 36/207 - (17%)

  Fly    14 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAE 78
            |||     ..||.|.|:...|..|||||.|.|.|.:.|:|:|.|.|||..||||:|:|.|.||||
  Rat     6 RPP-----NTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAE 65

  Fly    79 DALEAMDGRMLDGRELRVQMARYGRPSSPTRSSSGRRGGGGGGGSGGR-------RRSRSRSPMR 136
            |||..:|.:.:.||::.:|.|: |...:|.:..:..   |....|..|       |||||||..|
  Rat    66 DALHNLDRKWICGRQIEIQFAQ-GDRKTPNQMKAKE---GRNVYSSSRYDDYDRYRRSRSRSYER 126

  Fly   137 RRSRSPR-----RRSYS--------RSRSPGSHSPERRSK-----FSRSPVRGDSRNGIGSGSGG 183
            |||||..     |||||        |.|...|||...|.|     ||||  :.:||:...|....
  Rat   127 RRSRSRSFDYNYRRSYSPRNSRPTGRPRRSRSHSDNDRFKHRNRSFSRS--KSNSRSRSKSQPKK 189

  Fly   184 LAPAASRSRSRS 195
            ...|.|||||.|
  Rat   190 EMKAKSRSRSAS 201

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_001188794.1	RRM	<24..>100	CDD:223796	38/75 (51%)
		RRM_SRSF2_SRSF8	25..97	CDD:240757	36/71 (51%)
Srsf10	XP_006239282.1	RRM_SF	5..99	CDD:418427	44/98 (45%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1533297at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.920