Protein Alignment SC35 and Caper

DIOPT Version :10

• Sequence 1: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_609095.1
• Gene: Caper / 33989
• FlyBaseID: FBgn0031883
• Length: 594
• Species: Drosophila melanogaster
• Alignment Length: 192
• Identity: 62/192 - (32%)
• Similarity: 78/192 - (40%)
• Gaps: 42/192 - (21%)

  Fly     3 NGGGAGG-------LGAARPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYT 60
            ||.|.|.       ...:|...| ||  ..:.|....|::..|..:..:|..:.||    |||:.
  Fly    54 NGSGGGSSHKKQSKRSRSRSGSR-DG--KSRRDRGNERSSHRDKDKERDRNRDGGD----RDRHR 111

  Fly    61 RESRGFAFVRFYDK-RDAEDALEAMDGRMLDGRELRVQMARYGRPSSPTRSSSGRRGGGGG---- 120
            ||..        |: |:.|...|....|....|:.|....||| .....|.|..||||...
  Fly   112 REGG--------DRDRERERERERDRSRRSRSRDERGGGGRYG-DRDKDRRSRDRRGGSKSLQVD 167

  Fly   121 GGSGGRRRSRSRSPMRRRSRSP---RRRSYSRSRS-----PGSHSPERRSKFSRSPVRGDSR 174
            .....|||||||...|:| .||   |:||:||||.     .|::||.|     |||..|..|
  Fly   168 RSRDKRRRSRSRDQQRKR-LSPIRERKRSHSRSRDRNSRRRGTNSPRR-----RSPPNGADR 223

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	18/72 (25%)
Caper	NP_609095.1	SF-CC1	213..578	CDD:273721	6/16 (38%)