Protein Alignment SC35 and x16

DIOPT Version :10

• Sequence 1: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_723226.1
• Gene: x16 / 33967
• FlyBaseID: FBgn0028554
• Length: 258
• Species: Drosophila melanogaster
• Alignment Length: 236
• Identity: 77/236 - (32%)
• Similarity: 92/236 - (38%)
• Gaps: 82/236 - (34%)

  Fly    27 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLDG 91
            |.:|.......||..||...|.:..::|     .|...|||||.|...|||.||:..:|||.:.|
  Fly    12 VGDLGNNARKNDLEYVFGAYGSLRSVWI-----ARNPPGFAFVEFESARDAADAVRGLDGRTVCG 71

  Fly    92 RELRVQMA--RYGRPSSPTRSSSGRRGGGGGGGSGG----------------------------- 125
            |..||:::  :|      .||..|..|||||||.||
  Fly    72 RRARVELSTGKY------ARSGGGGGGGGGGGGGGGLGGRDRGGGGRGDDKCYECGGRGHFARHC 130

  Fly   126 -----RRRSRSRSPMRRRSRSPRRRSYS----RSRSPGSHSPERRSKFSRSPVRGDSRNGIGS-- 179
                 |:|.||.|..|.||.|.|||:.|    ||||..:.|..|||  .||  .|...||..|
  Fly   131 RERKARQRRRSNSFSRSRSTSRRRRTRSKSGTRSRSRSAGSVGRRS--GRS--NGRDENGSASRY 191

  Fly   180 ------GSGGL-------------------APAASRSRSRS 195
                  |||.:                   ....|||||||
  Fly   192 SDHERNGSGAVDSPPPPKRRYEDEDDDRVRGSPRSRSRSRS 232

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	26/69 (38%)
x16	NP_723226.1	RRM_SRSF3_like	9..81	CDD:409808	27/73 (37%)