Protein Alignment SC35 and rbmx

DIOPT Version :10

• Sequence 1: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_997763.1
• Gene: rbmx / 321860
• ZFINID: ZDB-GENE-030131-579
• Length: 379
• Species: Danio rerio
• Alignment Length: 240
• Identity: 66/240 - (27%)
• Similarity: 90/240 - (37%)
• Gaps: 86/240 - (35%)

  Fly    25 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRML 89
            |.:..|...|:.:.|...|.:.|.:.::.:.:||.|.:|||||||.:.:..||:||...|:|:.|
Zfish    10 LFIGGLNTETSEKVLEAYFSKFGRISEVLLMKDRETNKSRGFAFVTYENPGDAKDAAREMNGKPL 74

  Fly    90 DGRELRVQMARYGRPSSPTRSSSGRRG--------------GGGGGGSGGR-----------RRS 129
            ||:.::|:.|     :.|...:|||||              |..||.||.|           ..|
Zfish    75 DGKPIKVEQA-----TKPQFETSGRRGPPPPRSRGPSRGLRGSRGGPSGMRGPPSREPFFKGMSS 134

  Fly   130 RSRSPMR-----RRSRSPRRRSY--------SRSRSPGSHSPERRSKFSR----SPVRGD----- 172
            |...||:     |....|.:||.        ||.|.|....|.|.|..||    .|.|.|
Zfish   135 RGPPPMKRGPPERNGGPPPKRSAPSGPMGRPSRDRDPYGPPPRRDSLMSRRDDGPPHRDDHYGSK 199

  Fly   173 ----------------------------------SRNGIGSGSGG 183
                                              ||:..||||.|
Zfish   200 DSYSSRDYMSSRDSRDYGPPPRDYPYREYSGHSSSRDDYGSGSRG 244

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	25/71 (35%)
rbmx	NP_997763.1	RRM_RBMX_like	7..86	CDD:409816	27/80 (34%)
		PABP-1234	<10..204	CDD:130689	59/198 (30%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	57..379		50/193 (26%)