Protein Alignment SC35 and Rbmx

DIOPT Version :10

• Sequence 1: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_001020834.1
• Gene: Rbmx / 302855
• RGDID: 1565256
• Length: 390
• Species: Rattus norvegicus
• Alignment Length: 191
• Identity: 70/191 - (36%)
• Similarity: 88/191 - (46%)
• Gaps: 36/191 - (18%)

  Fly    25 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRML 89
            |.:..|...|..:.|..||.:.|.:.::.:.:||.|.:|||||||.|....||:||...|:|:.|
  Rat    10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSL 74

  Fly    90 DGRELRVQMA--------RYGRPSSPTRSSSGRRG-GGGGGGSGGRRRSRSRSP----------- 134
            ||:.::|:.|        |.|.| .|.||....|| .||.|||||.|...||..
  Rat    75 DGKAIKVEQATKPSFESGRRGLP-PPPRSRGPPRGLRGGRGGSGGTRGPPSRGGHMDDGGYSMNF 138

  Fly   135 MRRRSRSP---RRRSYSRSRSPGSHSPERRSKFSRSPVRGDSRNGIGSGSGGLAPAASRSR 192
            ....||.|   :|....||..|    |.:||..| .|||.      .||.||.|| .||.|
  Rat   139 TLSSSRGPLPVKRGPPPRSGGP----PPKRSAPS-GPVRS------SSGMGGRAP-VSRGR 187

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	27/71 (38%)
Rbmx	NP_001020834.1	RRM_RBMX_like	7..86	CDD:409816	29/75 (39%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	58..390		52/143 (36%)
		dnaA	165..>302	CDD:455861	14/31 (45%)
		RBM1CTR	173..217	CDD:400429	9/22 (41%)