DRSC/TRiP Functional Genomics Resources

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Protein Alignment SC35 and DAZAP1

DIOPT Version :10

Sequence 1:NP_652612.1 Gene:SC35 / 53444 FlyBaseID:FBgn0265298 Length:195 Species:Drosophila melanogaster
Sequence 2:XP_011526206.1 Gene:DAZAP1 / 26528 HGNCID:2683 Length:550 Species:Homo sapiens


Alignment Length:113 Identity:38/113 - (33%)
Similarity:49/113 - (43%) Gaps:16/113 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDAL----EAMD 85
            |.|..|.:.||.|.||..|.:.|||.|..|.:|:.|.:||||.||:|.|.......|    ..:|
Human   155 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLD 219

  Fly    86 GRMLDGRELRVQMARYGRPSSPTRSSSGRRGGGGGGGSGGRRRSRSRS 133
            ||.:|           .:|.:| |.....|.....|...|.|...|:|
Human   220 GRNID-----------PKPCTP-RGMQPERTRPKEGWQKGPRSDNSKS 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SC35NP_652612.1 RRM_SRSF2_SRSF8 25..97 CDD:409751 29/75 (39%)
DAZAP1XP_011526206.1 ELAV_HUD_SF <106..199 CDD:273741 20/43 (47%)
RRM1_DAZAP1 154..235 CDD:409988 32/91 (35%)
RRM2_DAZAP1 254..333 CDD:409765 1/2 (50%)

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