Protein Alignment SC35 and rna15

DIOPT Version :10

• Sequence 1: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_593884.1
• Gene: rna15 / 2543462
• PomBaseID: SPAC644.16
• Length: 422
• Species: Schizosaccharomyces pombe
• Alignment Length: 169
• Identity: 38/169 - (22%)
• Similarity: 61/169 - (36%)
• Gaps: 32/169 - (18%)

  Fly    27 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLDG 91
            |.|:.|....|.:..:|::.|.|....:..|..:.:.:|:.|..::|...|..|:..::......
pombe     9 VGNIPYEMAEEQVIDIFKQSGPVKSFQLVIDPESGQPKGYGFCEYHDPATAASAVRNLNNYDAGT 73

  Fly    92 RELRVQMARYGRPSSPTRSSSGRRGGGGGGGSGGRRRSRSRSPMR--RRSRSPRRRSYSRSRSPG 154
            |.|||..        ||....             ||..:...|.|  ...:|...:||:...:.|
pombe    74 RRLRVDF--------PTADQI-------------RRLDKLLGPSRYGYYPQSYANQSYTYGNNFG 117

  Fly   155 SHSPERRSK--------FSRSPVRGDSRNGIGSGSGGLA 185
            |:.|.:.|.        :...|..| .|.|....||.||
pombe   118 SYPPTQPSTQPLPQSYGYPSYPPAG-YRGGSARPSGVLA 155

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	16/69 (23%)
rna15	NP_593884.1	RRM_CSTF2_RNA15_like	5..80	CDD:409832	17/70 (24%)
		CSTF2_hinge	150..222	CDD:433869	4/6 (67%)