Protein Alignment SC35 and tcg1

DIOPT Version :10

• Sequence 1: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_595090.2
• Gene: tcg1 / 2541062
• PomBaseID: SPBC660.11
• Length: 349
• Species: Schizosaccharomyces pombe
• Alignment Length: 227
• Identity: 53/227 - (23%)
• Similarity: 81/227 - (35%)
• Gaps: 60/227 - (26%)

  Fly    27 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESR----GFAFVRFYDKRDAEDALEAMDGR 87
            |..|:..|...::|.:||..|.|..:.||..|..|.:|    |.|||.|.::.|.:.|:|.::|:
pombe    49 VGRLSTSTKKSEIRSLFETVGTVRKVTIPFRRVRRGTRLVPSGIAFVTFNNQEDVDKAIETLNGK 113

  Fly    88 MLDGRELRVQMAR--YGRP------------SSPTRSSSGRRGGGGGGGSGGRRRSRSRSPMRRR 138
            .||.||:.||.||  ..:|            ..|..|:|........|.|.....:.:.:|....
pombe   114 TLDDREIVVQKARPVQEQPIKDRKKSKNKNGEEPETSTSVENAESAKGSSDENEANTATAPSSNE 178

  Fly   139 SRSPRRRSYSRSRSPGS---------------------------------HSPERRSKFSRS--- 167
            :....::........||                                 ::|.|.....||
pombe   179 ANGVDKKQNEIKGKGGSGKNKAKPLPPNSIYVSGLSVTLTNEGLKEMFDAYNPTRARIAVRSLPP 243

  Fly   168 ------PVRGDSRNGIGSGSGGLAPAASRSRS 193
                  .:||:.|.|.|.|....|.|..:||:
pombe   244 YIIRRIKLRGEQRRGRGFGFVSFANAEDQSRA 275

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	26/73 (36%)
tcg1	NP_595090.2	PABP-1234	<33..>300	CDD:130689	53/227 (23%)