Protein Alignment SC35 and srp1

DIOPT Version :9

• Sequence 1: NP_001188794.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_596398.1
• Gene: srp1 / 2539818
• PomBaseID: SPBC11C11.08
• Length: 275
• Species: Schizosaccharomyces pombe
• Alignment Length: 206
• Identity: 80/206 - (38%)
• Similarity: 97/206 - (47%)
• Gaps: 50/206 - (24%)

  Fly    20 DGMVSLKVDNLTYRTTPEDLRRVFE---RCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDAL 81
            |||   :...|.|...|      |.   ||    ||.|||   ||.||.||||.:.|.||||||.
pombe    16 DGM---RARELAYEFEP------FGPLIRC----DIPIPR---TRTSRPFAFVEYEDSRDAEDAY 64

  Fly    82 EAMDGRMLD--GRELRVQMARYGRPSSPTRSSSGRRGGGGG-GGSGGRRRSRSRSPMRRRSRSP- 142
            ..:.||.|:  |..|||:.|:...||.|.....|||..||. .|..||.||||.||...|||||
pombe    65 YEVHGRRLERGGGVLRVEWAKQPPPSGPGSKRGGRRERGGRVHGDSGRLRSRSPSPHEARSRSPY 129

  Fly   143 ------RR----RSYSRSRSPG--SHSP--ERRS-----------KFS--RSPVRGDSRNGIGSG 180
                  ||    |..||||||.  |.||  :|||           .|:  :|||..::...:.:|
pombe   130 NDERSDRRSMSPRYRSRSRSPDGRSRSPDYDRRSPKRNHRSPSPVSFAPQKSPVENETETNVDNG 194

  Fly   181 SGGLAPAASRS 191
            ...::.:..:|
pombe   195 DTKISESNEKS 205

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_001188794.1	RRM	<24..>100	CDD:223796	33/80 (41%)
		RRM_SRSF2_SRSF8	25..97	CDD:240757	32/76 (42%)
srp1	NP_596398.1	RRM_Srp1p_like	8..85	CDD:240913	36/84 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	85	1.000	Inparanoid score	I1801
OMA	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0003650
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.050