DRSC/TRiP Functional Genomics Resources

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Protein Alignment SC35 and CSTF2T

DIOPT Version :10

Sequence 1:NP_652612.1 Gene:SC35 / 53444 FlyBaseID:FBgn0265298 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_056050.1 Gene:CSTF2T / 23283 HGNCID:17086 Length:616 Species:Homo sapiens


Alignment Length:117 Identity:33/117 - (28%)
Similarity:47/117 - (40%) Gaps:21/117 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 AARPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRD 76
            |.|.|.....:.|:.|.|:.|..|.|.|:.:|...|.|....:..||.|.:.:|:.|..:.|:..
Human     5 AVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQET 69

  Fly    77 AEDALEAMDGRMLDGRELRVQMAR---------------------YGRPSSP 107
            |..|:..::||...||.|||..|.                     ||.|..|
Human    70 ALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPIDP 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SC35NP_652612.1 RRM_SRSF2_SRSF8 25..97 CDD:409751 23/71 (32%)
CSTF2TNP_056050.1 RRM_CSTF2_CSTF2T 10..94 CDD:410072 26/83 (31%)
CSTF2_hinge 112..191 CDD:433869 4/10 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..241
PRK12323 <242..>387 CDD:481241
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 262..418
9 X 5 AA tandem repeats of M-E-T-R-[AG] 418..462
9 X 5 AA tandem repeats of G-[AT]-G-[MI]-Q 505..549
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 542..573
CSTF_C 572..612 CDD:464130
Blue background indicates that the domain is not in the aligned region.

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