DRSC/TRiP Functional Genomics Resources

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Protein Alignment SC35 and Srsf7

DIOPT Version :9

Sequence 1:NP_001188794.1 Gene:SC35 / 53444 FlyBaseID:FBgn0265298 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_666195.1 Gene:Srsf7 / 225027 MGIID:1926232 Length:238 Species:Mus musculus


Alignment Length:206 Identity:78/206 - (37%)
Similarity:96/206 - (46%) Gaps:39/206 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 RIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALE 82
            |..|...:.|.||.......:|.|.|...|.:..::|     .|...|||||.|.|.||||||:.
Mouse     6 RYGGETKVYVGNLGTGAGKGELERAFSYYGPLRTVWI-----ARNPPGFAFVEFEDPRDAEDAVR 65

  Fly    83 AMDGRMLDGRELRVQM-------ARYGRPSSPTRSSSGRRGGGGGGGSGG-----------RRRS 129
            .:||:::.|..:||::       :|:.||  |.|............|..|           ||||
Mouse    66 GLDGKVICGSRVRVELSTGMPRRSRFDRP--PARRPFDPNDRCYECGEKGHYAYDCHRYSRRRRS 128

  Fly   130 RSRSPMRRRSRSPRRRSYSRSRSPG----SHSPER-RS---KFSRSPVRGDSRNG--IGSGSGGL 184
            ||||....|||. ||.|.|||||.|    |.||.| ||   :.|||.....||:|  |||   ..
Mouse   129 RSRSRSHSRSRG-RRYSRSRSRSRGRRSRSASPRRSRSVSLRRSRSASLRRSRSGSIIGS---RY 189

  Fly   185 APAASRSRSRS 195
            ..:.|||||||
Mouse   190 FQSRSRSRSRS 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SC35NP_001188794.1 RRM <24..>100 CDD:223796 27/82 (33%)
RRM_SRSF2_SRSF8 25..97 CDD:240757 26/71 (37%)
Srsf7NP_666195.1 RRM_SRSF7 12..88 CDD:410050 27/80 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1533297at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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