DRSC/TRiP Functional Genomics Resources

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Protein Alignment SC35 and rbmx-2

DIOPT Version :10

Sequence 1:NP_652612.1 Gene:SC35 / 53444 FlyBaseID:FBgn0265298 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_495237.1 Gene:rbmx-2 / 183040 WormBaseID:WBGene00016245 Length:302 Species:Caenorhabditis elegans


Alignment Length:70 Identity:25/70 - (35%)
Similarity:42/70 - (60%) Gaps:0/70 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLDG 91
            :..|:|..:..|:..||.:.|||.:|.:.||:.|.:|:||||:.:.|:|....|::..:|..|..
 Worm    42 IGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNFNGISLHK 106

  Fly    92 RELRV 96
            |.:||
 Worm   107 RMIRV 111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SC35NP_652612.1 RRM_SRSF2_SRSF8 25..97 CDD:409751 25/70 (36%)
rbmx-2NP_495237.1 RRM_ist3_like 29..117 CDD:409845 25/70 (36%)

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