Protein Alignment SC35 and rsp-6

DIOPT Version :10

• Sequence 1: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_741446.1
• Gene: rsp-6 / 177566
• WormBaseID: WBGene00004703
• Length: 179
• Species: Caenorhabditis elegans
• Alignment Length: 184
• Identity: 70/184 - (38%)
• Similarity: 88/184 - (47%)
• Gaps: 30/184 - (16%)

  Fly    27 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLDG 91
            |..|....|.::|..:|:|.|.:..:::     .|...|||||.:.|.||||||:.|:||..:.|
 Worm     7 VGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVRALDGSRICG 66

  Fly    92 RELRVQMARYGRPSSPTRSSSGRRGGGGGGGSGG---------RRRSRSRSPMRRRSRS-----P 142
            ...||:::     :...|...||.||.||.|.||         |.||||||..|.|.||     .
 Worm    67 VRARVELS-----TGQRRGGGGRGGGFGGRGGGGRDRSPYRGDRGRSRSRSRDRGRDRSRDRSRD 126

  Fly   143 RRRSYSRSRS-PGSHSPERRSKFSRSPVRGDSRNGIGSGSGGLAPAASRSRSRS 195
            |.|..||.|| ..|...||....||||...|.     |.|...:.:.|||||||
 Worm   127 RSRDRSRDRSRERSRERERTRSRSRSPQERDR-----SHSKSRSRSRSRSRSRS 175

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	25/69 (36%)
rsp-6	NP_741446.1	RRM_SRSF3_like	4..75	CDD:409808	26/77 (34%)