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Protein Alignment SC35 and rsp-6
DIOPT Version :9
Sequence 1: | NP_001188794.1 |
Gene: | SC35 / 53444 |
FlyBaseID: | FBgn0265298 |
Length: | 195 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_741446.1 |
Gene: | rsp-6 / 177566 |
WormBaseID: | WBGene00004703 |
Length: | 179 |
Species: | Caenorhabditis elegans |
Alignment Length: | 184 |
Identity: | 70/184 - (38%) |
Similarity: | 88/184 - (47%) |
Gaps: | 30/184 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 27 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLDG 91
|..|....|.::|..:|:|.|.:..::: .|...|||||.:.|.||||||:.|:||..:.|
Worm 7 VGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVRALDGSRICG 66
Fly 92 RELRVQMARYGRPSSPTRSSSGRRGGGGGGGSGG---------RRRSRSRSPMRRRSRS-----P 142
...||::: :...|...||.||.||.|.|| |.||||||..|.|.|| .
Worm 67 VRARVELS-----TGQRRGGGGRGGGFGGRGGGGRDRSPYRGDRGRSRSRSRDRGRDRSRDRSRD 126
Fly 143 RRRSYSRSRS-PGSHSPERRSKFSRSPVRGDSRNGIGSGSGGLAPAASRSRSRS 195
|.|..||.|| ..|...||....||||...|. |.|...:.:.|||||||
Worm 127 RSRDRSRDRSRERSRERERTRSRSRSPQERDR-----SHSKSRSRSRSRSRSRS 175
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
1 |
0.950 |
- |
0.928771 |
Normalized mean entropy |
S1239 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1533297at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.960 |
|
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