Protein Alignment SC35 and sgnh-1

DIOPT Version :10

• Sequence 1: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_500666.2
• Gene: sgnh-1 / 177260
• WormBaseID: WBGene00020354
• Length: 177
• Species: Caenorhabditis elegans
• Alignment Length: 150
• Identity: 36/150 - (24%)
• Similarity: 63/150 - (42%)
• Gaps: 30/150 - (20%)

  Fly    24 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRM 88
            |:.|.|:.:::|..::...|..||:|..:.||:|::|...:.||||.|......:.|| .:.|.|
 Worm    47 SVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESVQLAL-VLSGTM 110

  Fly    89 LDGRELRVQMARYGRPSSPTRSSSGRRGGGGGGGSGGRRRSRSRSPMRRRSRSPRRRSYSRSRSP 153
            ...|::.|.:.|..:|                    |..|:.:       ::.|...:.|....|
 Worm   111 FRNRKIMVTLKRTNKP--------------------GMGRTAT-------AQKPAHFAKSSHGKP 148

  Fly   154 GSHSPERRSK--FSRSPVRG 171
            |||......|  :..:|:.|
 Worm   149 GSHQGVTVVKYVYVNAPING 168

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	21/71 (30%)
sgnh-1	NP_500666.2	RRM_II_PABPs	47..119	CDD:409747	22/72 (31%)