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Protein Alignment SC35 and rbm-39
DIOPT Version :10
| Sequence 1: | NP_652612.1 |
Gene: | SC35 / 53444 |
FlyBaseID: | FBgn0265298 |
Length: | 195 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_500025.1 |
Gene: | rbm-39 / 176922 |
WormBaseID: | WBGene00021921 |
Length: | 580 |
Species: | Caenorhabditis elegans |
| Alignment Length: | 127 |
Identity: | 48/127 - (37%) |
| Similarity: | 54/127 - (42%) |
Gaps: | 17/127 - (13%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 78 EDALEAMDGRMLDGRELRVQMARYGRPSSPTRSSSGRRGGGGG----GGSGGRRRSRSRSPMRR- 137
|..||.........|:.....:...|..|..|.||.||..... |..|.||||||||..||
Worm 13 EGGLEMAKNDRSQSRQRSPARSNRSRSRSKDRKSSSRRSRSRSRDRRGDRGDRRRSRSRSKDRRT 77
Fly 138 -RSRSP-RRRSYSRSRSPGSHSPERRSKFSRS-------PVRGDSRNGIGSGSGGLAPAASR 190
|.||| |.|..||||..| :|.|||: :|| |.|.|.|.......|..:|..||
Worm 78 TRRRSPSRERRRSRSRDRG--APRRRSR-TRSRDRRRSPPRRRDRRTPPRRSPGRRSPPRSR 136
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| SC35 | NP_652612.1 |
RRM_SRSF2_SRSF8 |
25..97 |
CDD:409751 |
4/18 (22%) |
| rbm-39 | NP_500025.1 |
SF-CC1 |
140..515 |
CDD:273721 |
|
|
Blue background indicates that the domain is not in
the aligned region.
|
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