Protein Alignment SC35 and rnp-7

DIOPT Version :10

• Sequence 1: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_498565.2
• Gene: rnp-7 / 176002
• WormBaseID: WBGene00004390
• Length: 332
• Species: Caenorhabditis elegans
• Alignment Length: 239
• Identity: 59/239 - (24%)
• Similarity: 76/239 - (31%)
• Gaps: 87/239 - (36%)

  Fly    12 AARPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRD 76
            |..|....|...:|.|..:.|.|:...|||.||..|::..:.:..|. ..:.||:||:.:.||.:
 Worm    93 AENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHDE-AGKPRGYAFIEYSDKAE 156

  Fly    77 AEDALEAMDGRMLDGRELRVQMARYGRPSS----------------------------------- 106
            ...|.:..||..:||:.|.|...| ||...
 Worm   157 MHTAYKKADGIKVDGKRLVVDYER-GRTQKTWLPRRLGGGKGDTRKTREAKSVIEEREIASGFGG 220

  Fly   107 ----------------------------PTRSSSG----RRGGGGGGGSGGRRRSRSRSPMRRRS 139
                                        ..|.|||    .||||||.|.|||.|...||
 Worm   221 GYEDRDRERSGSRDRRQDSYRNGGGNDRDRRESSGGFRDNRGGGGGFGGGGRDRFNDRS------ 279

  Fly   140 RSPRRRSYSRSRSPGSHSPERRSKFSRSPVRGDSRNGIGSGSGG 183
                        ..|.:..:|.....|...||.||...|.||||
 Worm   280 ------------GGGGYGGDRDRGGDRGGDRGGSRYSTGGGSGG 311

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	23/71 (32%)
rnp-7	NP_498565.2	U1snRNP70_N	4..95	CDD:432406	1/1 (100%)
		RRM_snRNP70	103..192	CDD:409682	27/90 (30%)