Protein Alignment SC35 and rsp-1

DIOPT Version :10

• Sequence 1: NP_652612.1
• Gene: SC35 / 53444
• FlyBaseID: FBgn0265298
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_496442.1
• Gene: rsp-1 / 174748
• WormBaseID: WBGene00004698
• Length: 312
• Species: Caenorhabditis elegans
• Alignment Length: 269
• Identity: 72/269 - (26%)
• Similarity: 92/269 - (34%)
• Gaps: 116/269 - (43%)

  Fly    27 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFYDKRDAEDALEAMDGRMLDG 91
            :..||.|.:.:|:...|...|::.|:.:        ..||.||.|.||||||||:..::|:.|.|
 Worm     7 IGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHDLNGKELGG 63

  Fly    92 RELRVQMARYGRPSSPTRSSSGRRGGGGGGGSGGRR-----------RSR----SRSPMRRRSR- 140
            ..:   :..|.:|    |...|.|||.||||.||.|           |.|    .|.|.||.||
 Worm    64 ERV---ILDYSKP----RGGGGDRGGFGGGGRGGARVSSYSGGGGGGRDRFDRYDRGPPRRESRY 121

  Fly   141 ----------------------------------------------------SP----------- 142
                                                                :|
 Worm   122 GRPYSTRHRVVVENLSSRISWQDLKDQVRRQGVEPTYAEAHKRPNEALLCFATPSDLKRCIEKCD 186

  Fly   143 --------------------RRRSYSRSRSPGSHSPERRSKFSRSPVRGDSRN-GIGSGSGGLAP 186
                                |.||.||||| .|.|.:||...|||..|..||: .....|...:.
 Worm   187 GMDLNGRKIKMIDDSQAGRSRSRSNSRSRS-RSRSRDRRRSRSRSSSRSKSRSRSPPKRSRRESK 250

  Fly   187 AASRSRSRS 195
            :.|||||||
 Worm   251 SKSRSRSRS 259

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SC35	NP_652612.1	RRM_SRSF2_SRSF8	25..97	CDD:409751	23/69 (33%)
rsp-1	NP_496442.1	RRM1_SRSF4_like	4..73	CDD:409774	24/76 (32%)
		RRM2_SRSF1_4_like	129..198	CDD:409776	1/68 (1%)